Quantifying the effect of experimental perturbations in scRNA-seq data.
Note, this repository is under active development. Please check back on Monday Feb 4th 2019 for Version 0.1.
You can use meld with your single cell data as follows:
import meld import graphtools G = graphtools.Graph(data, use_pygsp=True) meld_score = meld.meld(label, G=G, beta=0.5)