meld

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Quantifying the effect of experimental perturbations in scRNA-seq data.

Note, this repository is under active development. Please check back on Monday Feb 4th 2019 for Version 0.1.

Quick Start

You can use meld with your single cell data as follows:

import meld
import graphtools
G = graphtools.Graph(data, use_pygsp=True)
meld_score = meld.meld(label, G=G, beta=0.5)

Help

If you have any questions or require assistance using MELD, please contact us at https://krishnaswamylab.org/get-help